8C2Z
Crystal structure of DYRK1B in complex with AZ191
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-15 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 115.896, 121.509, 54.021 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.410 - 1.910 |
R-factor | 0.1789 |
Rwork | 0.177 |
R-free | 0.21960 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.315 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.410 | 1.950 |
High resolution limit [Å] | 1.910 | 1.910 |
Rmerge | 0.078 | 2.035 |
Rmeas | 0.083 | 2.164 |
Rpim | 0.029 | 0.726 |
Total number of observations | 242154 | 16608 |
Number of reflections | 29064 | 1945 |
<I/σ(I)> | 13.8 | 1.3 |
Completeness [%] | 97.1 | |
Redundancy | 8.3 | 8.5 |
CC(1/2) | 0.999 | 0.453 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M Bis-Tris pH 5.5, 25% PEG3350, 0.2 M magnesium chloride, 0.1 M manganese (II) chloride. |