8BYX
HOXB13-homodimer bound to DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-06 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9724 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 116.779, 116.779, 118.057 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 3.000 |
R-factor | 0.25635 |
Rwork | 0.254 |
R-free | 0.30432 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.408 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.030 | 3.070 |
High resolution limit [Å] | 2.910 | 2.910 |
Rmeas | 0.134 | 4.116 |
Rpim | 0.050 | 1.458 |
Total number of observations | 138874 | 19863 |
Number of reflections | 18396 | 2551 |
<I/σ(I)> | 8.6 | 0.7 |
Completeness [%] | 99.5 | |
Redundancy | 7.5 | 7.8 |
CC(1/2) | 0.995 | 0.323 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 293 | 24 % PEG 1500 MME, 0.15M potassium chloride, 0.05M Tris-HCl buffer, 2%PEG 400 |