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8BPQ

crystal structure of N-ethylmaleimide reductase with mutation Y187F (nemA Y187F) from Escherichia coli

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]77
Detector technologyPIXEL
Collection date2022-01-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.88560
Spacegroup nameP 32
Unit cell lengths96.062, 96.062, 100.350
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution24.270 - 2.300
R-factor0.1955
Rwork0.193
R-free0.24460
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3p7y
Data reduction softwareXDS (Built=20200417)
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]24.27124.2712.210
High resolution limit [Å]2.1006.6402.100
Rmerge0.1501.222
Rmeas0.4670.1591.285
Rpim0.1480.0530.396
Total number of observations911347747
Number of reflections4579710824566
<I/σ(I)>6.4122.4
Completeness [%]99.998.1100
Redundancy9.98.410.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.8288.150.2 M Potassium bromide, 0.2 M Potassium thiocyanate, 0.1 M Tris pH 7.8, 3 % w/v PGA (Na+ form, LM) 2 % w/v PEG 3350 5 mM Tb-XO4

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PDB entries from 2024-10-09

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