8BOM
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 14
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-10-23 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.9184 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 32.560, 107.000, 40.360 |
| Unit cell angles | 90.00, 108.56, 90.00 |
Refinement procedure
| Resolution | 31.120 - 1.120 |
| R-factor | 0.1641 |
| Rwork | 0.164 |
| R-free | 0.17680 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6q7d |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.124 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.260 | 1.190 |
| High resolution limit [Å] | 1.120 | 1.120 |
| Rmeas | 0.093 | 0.184 |
| Number of reflections | 94907 | 14488 |
| <I/σ(I)> | 11.5 | 0.95 |
| Completeness [%] | 94.4 | 89.5 |
| Redundancy | 6.97 | 6.8 |
| CC(1/2) | 1.000 | 0.430 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 291 | 37,5 % Precipitant Mix 4 (25% (v/v) Hexylene glycol, 25% (w/v) Poly(ethylene glycol) 1000, 25% (w/v) Poly(ethylene glycol) 3350), 0.1M Bicin pH 7.6, 0.1 M Amino acids mix (0.2 M DL-Alanine, 0.2M DL-Glutamic acid monohydrate, 0.2M DL-Lysine monohydrochloride, 0.2M DL-Serine, 0.2M Glycine) |






