8BJ6
Crystal structure of YopR
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2021-05-20 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9718 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 189.682, 108.007, 53.601 |
| Unit cell angles | 90.00, 90.36, 90.00 |
Refinement procedure
| Resolution | 94.840 - 2.600 |
| R-factor | 0.21977 |
| Rwork | 0.218 |
| R-free | 0.25450 |
| Structure solution method | SAD |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.518 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | CRANK2 |
| Refinement software | REFMAC (v7.0) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 94.840 | 2.740 |
| High resolution limit [Å] | 2.600 | 2.600 |
| Rmeas | 0.095 | 0.460 |
| Rpim | 0.037 | 0.194 |
| Total number of observations | 209837 | 26583 |
| Number of reflections | 32678 | 4555 |
| <I/σ(I)> | 12.5 | 3.8 |
| Completeness [%] | 98.2 | |
| Redundancy | 6.4 | 5.8 |
| CC(1/2) | 0.998 | 0.933 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 294 | 20% (w/v) PEG 8000, 100 mM Sodium phosphate dibasic/ Citric acid pH 4.2, 200 mM Sodium chloride |
