8BFS
Crystal structure of human calmodulin-dependent protein kinase 1D (CAMK1D) in complex with FZ326
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.999990 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 57.809, 45.948, 108.535 |
Unit cell angles | 90.00, 103.96, 90.00 |
Refinement procedure
Resolution | 42.150 - 1.950 |
R-factor | 0.1681 |
Rwork | 0.166 |
R-free | 0.20180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6t29 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.508 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.9) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.150 | 42.120 | 2.000 |
High resolution limit [Å] | 1.950 | 8.940 | 1.950 |
Rmerge | 0.090 | 0.031 | 0.618 |
Rmeas | 0.097 | 0.033 | 0.669 |
Rpim | 0.037 | 0.013 | 0.253 |
Total number of observations | 1487 | 7813 | |
Number of reflections | 19398 | 229 | 1159 |
<I/σ(I)> | 15.2 | 47.5 | 3.4 |
Completeness [%] | 95.5 | 98.3 | 79.2 |
Redundancy | 7 | 6.5 | 6.7 |
CC(1/2) | 0.999 | 0.999 | 0.906 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.9 | 293 | 0,1M NaCit, pH 5.9 2,1 M AmmSO4 0,1M Na/K tartrate |