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8B23

Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 600-seconds post reaction initiation with Na+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-18
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.976
Spacegroup nameP 1 21 1
Unit cell lengths83.327, 111.552, 106.217
Unit cell angles90.00, 109.05, 90.00
Refinement procedure
Resolution100.400 - 3.840
R-factor0.3357
Rwork0.334
R-free0.36340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5lzq D_1292125586
RMSD bond length0.003
RMSD bond angle0.725
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]100.4004.170
High resolution limit [Å]3.8403.840
Rmerge0.1650.779
Number of reflections13078654
<I/σ(I)>4.4
Completeness [%]90.7
Redundancy6.5
CC(1/2)0.9650.646
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829360 mM Tris-HCl pH 8.0, 26% v/v PEG400, 175 mM KCl, 2.4 mM MgCl2, 2 mM K4PPi, 20 mM NaCl

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