8AOM
Complex of PD-L1 with VHH1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE MASSIF-1 |
| Synchrotron site | ESRF |
| Beamline | MASSIF-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-09-09 |
| Detector | DECTRIS PILATUS3 S 1M |
| Wavelength(s) | 0.965459 |
| Spacegroup name | I 21 3 |
| Unit cell lengths | 149.512, 149.512, 149.512 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.324 - 2.202 |
| Rwork | 0.208 |
| R-free | 0.24470 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4zqk |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.611 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.324 | 47.280 | 2.270 |
| High resolution limit [Å] | 2.200 | 9.080 | 2.200 |
| Rmerge | 0.072 | 0.043 | 1.930 |
| Rmeas | 0.083 | 0.049 | 2.244 |
| Rpim | 0.039 | 0.022 | 1.116 |
| Number of reflections | 28213 | 436 | 2424 |
| <I/σ(I)> | 10.2 | ||
| Completeness [%] | 99.9 | ||
| Redundancy | 7.6 | 7.4 | 7.1 |
| CC(1/2) | 0.993 | 0.978 | 0.287 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 0.1 M MOPS, pH 7.5, and 12% (w/v) PEG 8000 |






