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8AE4

Crystal structure of human legumain in complex with Clitocypin 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2018-09-30
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9677
Spacegroup nameP 1 21 1
Unit cell lengths42.467, 63.628, 85.532
Unit cell angles90.00, 102.06, 90.00
Refinement procedure
Resolution41.530 - 1.790
R-factor0.1923
Rwork0.192
R-free0.20790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7o50
RMSD bond length0.007
RMSD bond angle1.024
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.8201.900
High resolution limit [Å]1.7901.790
Rmeas0.1401.460
Number of reflections408935729
<I/σ(I)>11.211.16
Completeness [%]97.0
Redundancy7.74
CC(1/2)0.9900.490
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.1 M sodium citrate pH 4.5, 20% PEG 4000

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