8AAS
Crystal structure of the Pyrococcus abyssi RPA trimerization core bound to poly-dT20 ssDNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978565 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 75.234, 75.234, 215.487 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.260 - 3.200 |
R-factor | 0.2655 |
Rwork | 0.264 |
R-free | 0.29330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Working model of the full apo-RPA |
RMSD bond length | 0.008 |
RMSD bond angle | 0.850 |
Data reduction software | XDS (VERSION Feb 5, 2021) |
Data scaling software | STARANISO (2.3.77) |
Phasing software | MOLREP (11.7.03) |
Refinement software | BUSTER (2.10.4 (3-FEB-2022)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.260 | 3.280 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.067 | 4.189 |
Rmeas | 0.068 | 4.270 |
Rpim | 0.013 | 0.816 |
Number of reflections | 10041 | 204 |
<I/σ(I)> | 27.1 | 1 |
Completeness [%] | 80.7 | 21.2 |
Redundancy | 27.2 | 26.8 |
CC(1/2) | 1.000 | 0.454 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 277 | 10% w/v PEG 8K 0.1M imidazole pH 8 0.2 M calcium acetate |