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8AAS

Crystal structure of the Pyrococcus abyssi RPA trimerization core bound to poly-dT20 ssDNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-09
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.978565
Spacegroup nameP 32 2 1
Unit cell lengths75.234, 75.234, 215.487
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.260 - 3.200
R-factor0.2655
Rwork0.264
R-free0.29330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Working model of the full apo-RPA
RMSD bond length0.008
RMSD bond angle0.850
Data reduction softwareXDS (VERSION Feb 5, 2021)
Data scaling softwareSTARANISO (2.3.77)
Phasing softwareMOLREP (11.7.03)
Refinement softwareBUSTER (2.10.4 (3-FEB-2022))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2603.280
High resolution limit [Å]3.2003.200
Rmerge0.0674.189
Rmeas0.0684.270
Rpim0.0130.816
Number of reflections10041204
<I/σ(I)>27.11
Completeness [%]80.721.2
Redundancy27.226.8
CC(1/2)1.0000.454
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP827710% w/v PEG 8K 0.1M imidazole pH 8 0.2 M calcium acetate

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PDB entries from 2024-05-15

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