7ZZK
Structure of the N-acetyl-D-glucosamine oxidase from Ralstonia Solanacearum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-03 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9655 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.958, 105.009, 120.671 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.000 - 1.500 |
R-factor | 0.1526 |
Rwork | 0.151 |
R-free | 0.17780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2y08 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.867 |
Data scaling software | Aimless (0.7.7) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.140 | 48.140 | 1.530 |
High resolution limit [Å] | 1.500 | 8.220 | 1.500 |
Rmerge | 0.080 | 0.046 | 0.670 |
Rmeas | 0.090 | 0.052 | 0.744 |
Rpim | 0.039 | 0.024 | 0.319 |
Total number of observations | 894285 | 5549 | 45993 |
Number of reflections | 178041 | 1214 | 8774 |
<I/σ(I)> | 12 | 30.2 | 2.4 |
Completeness [%] | 99.7 | 98.6 | 100 |
Redundancy | 5 | 4.6 | 5.2 |
CC(1/2) | 0.998 | 0.996 | 0.732 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 19% PEG33350 0.19 M sodium nitrate |