7ZXD
Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with an inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-15 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 137.237, 69.218, 144.140 |
Unit cell angles | 90.00, 94.35, 90.00 |
Refinement procedure
Resolution | 47.910 - 2.090 |
R-factor | 0.1971 |
Rwork | 0.196 |
R-free | 0.21900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xn8 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.572 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.910 | 2.130 |
High resolution limit [Å] | 2.090 | 2.090 |
Rmerge | 0.054 | 0.470 |
Rmeas | 0.058 | |
Rpim | 0.022 | 0.200 |
Number of reflections | 79538 | 4496 |
<I/σ(I)> | 19.5 | 3.1 |
Completeness [%] | 99.3 | 99.2 |
Redundancy | 6.9 | |
CC(1/2) | 0.999 | 0.904 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 277.15 | 0.1M MES pH 6.2, 1.9M Ammonium sulphate |