7ZVS
Crystal structure of the Schistosoma mansoni VKR2 kinase domain in an active-like state (ADP-bound)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 206.258, 97.239, 72.944 |
Unit cell angles | 90.00, 97.52, 90.00 |
Refinement procedure
Resolution | 55.810 - 3.070 |
R-factor | 0.2192 |
Rwork | 0.217 |
R-free | 0.25160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oj9 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.819 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 102.240 | 3.290 |
High resolution limit [Å] | 3.060 | 3.060 |
Rmerge | 0.084 | 0.820 |
Number of reflections | 16396 | 821 |
<I/σ(I)> | 2.4 | 2.5 |
Completeness [%] | 87.3 | |
Redundancy | 4.6 | |
CC(1/2) | 0.990 | 0.420 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 277 | 0.8 M succinic acid, pH 7.0, 100mM KCl and 50mM NaF |