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7ZVM

Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-20
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.98
Spacegroup nameI 2 2 2
Unit cell lengths48.482, 52.410, 112.868
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.580 - 1.580
R-factor0.1754
Rwork0.173
R-free0.21200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)alphafold2
RMSD bond length0.017
RMSD bond angle1.857
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.5801.670
High resolution limit [Å]1.5801.580
Number of reflections380081050
<I/σ(I)>7.66
Completeness [%]98.9
Redundancy3.39
CC(1/2)0.9970.180
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2980.12 M monosaccharide mix, 0.1M buffer system 2 pH 8.5 and 50% V/V MPD (F7 Morpheus conditions)

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