7ZUP
Human PRMT5:MEP50 structure with Fragment (Example 18) and MTA Bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9197 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 104.282, 138.654, 178.871 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 109.590 - 2.010 |
R-factor | 0.2214 |
Rwork | 0.219 |
R-free | 0.27080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5eml |
RMSD bond length | 0.007 |
RMSD bond angle | 1.520 |
Data reduction software | XDS (Feb 5, 2021 (BUILT 20210323)) |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC (5.8.0267) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 109.590 | 2.260 |
High resolution limit [Å] | 1.970 | 1.970 |
Number of reflections | 39692 | 1985 |
<I/σ(I)> | 10.7 | |
Completeness [%] | 93.3 | 90.9 |
Redundancy | 11.9 | |
CC(1/2) | 0.990 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 281 | 15% PEG3350, 100 mM Na citrate, pH 5.4, 100mM Carboxylic acids |