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7ZQI

MHC class I from a wild bird in complex with a nonameric peptide P2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-12
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97940
Spacegroup nameP 21 21 21
Unit cell lengths39.202, 48.780, 202.135
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.580 - 2.150
R-factor0.18245
Rwork0.180
R-free0.22937
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5gjx
RMSD bond length0.013
RMSD bond angle1.837
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.3802.210
High resolution limit [Å]2.1502.150
Number of reflections220441759
<I/σ(I)>12.11.9
Completeness [%]99.999.8
Redundancy1313.4
CC(1/2)0.9990.848
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293100 mM Hepes/MOPS, pH 7.0, 20 mM MgCl2, 40 mM CaCl2, 25 % (v/v) MPD, 25 % (w/v) PEG 1000, 25 % (w/v) PEG 3350

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