7ZPS
Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 3 |
Unit cell lengths | 105.660, 105.660, 105.660 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.250 - 1.560 |
R-factor | 0.1817 |
Rwork | 0.181 |
R-free | 0.20240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hih |
RMSD bond length | 0.015 |
RMSD bond angle | 2.331 |
Data reduction software | xia2 |
Data scaling software | Aimless (0.5.23) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.250 | 47.250 | 1.600 |
High resolution limit [Å] | 1.560 | 6.980 | 1.560 |
Rmerge | 0.078 | 0.041 | 2.359 |
Rmeas | 0.080 | 0.043 | 2.419 |
Rpim | 0.018 | 0.010 | 0.533 |
Total number of observations | 1109946 | 12971 | 84914 |
Number of reflections | 56066 | 701 | 4133 |
<I/σ(I)> | 20 | 64.6 | 1.5 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 19.8 | 18.5 | 20.5 |
CC(1/2) | 0.999 | 0.998 | 0.546 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 2 microlitres of 15 mg/ml protein in 0.1 M HEPES buffer, pH 7.5, mixed with with an equivalent volume of reservoir solution containing 0.01 M ZnSO4, 35% PEG 550 (v/v) and 0.1 M MES, pH 6.5. Cryoprotection in ML plus 10% glycerol |