7ZO0
Crystal structure of catalytic inactive unliganded form of FucOB, a GH95 family alpha-1,2-fucosidase from Akkermansia muciniphila
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97926 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.582, 87.507, 95.586 |
Unit cell angles | 90.00, 102.86, 90.00 |
Refinement procedure
Resolution | 52.240 - 1.950 |
R-factor | 0.2041 |
Rwork | 0.204 |
R-free | 0.21420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7znz |
RMSD bond length | 0.004 |
RMSD bond angle | 0.622 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20_4459: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.240 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.130 | 1.223 |
Rmeas | 0.141 | 1.323 |
Rpim | 0.054 | 0.498 |
Number of reflections | 423928 | 43184 |
<I/σ(I)> | 12.84 | 1.91 |
Completeness [%] | 99.8 | 99.77 |
Redundancy | 6.8 | 7 |
CC(1/2) | 0.998 | 0.648 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 200mM sodium chloride, 20% (w/v) PEG 3350 (PEG ION suite protein crystallization screening, Hampton Research) |