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7ZN8

Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 7.0 in the presence of sodium at 100K

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976
Spacegroup nameP 21 21 21
Unit cell lengths68.600, 109.600, 119.300
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.200
R-factor0.1998
Rwork0.198
R-free0.23850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xio
RMSD bond length0.004
RMSD bond angle1.091
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.7982.293
High resolution limit [Å]2.2002.200
Rmerge0.1633.775
Number of reflections372911865
<I/σ(I)>10.90.8
Completeness [%]85.5
Redundancy13.1
CC(1/2)0.9980.500
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE2930.8 M Na/K-Pi pH 8.2 crystals soaked in 1.2 M Na/K-Pi pH 7.0 before harvesting

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