7ZIB
Crystal structure of dCK C4S-S74E mutant in complex with UDP and the OR0635 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-28 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.965459 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 68.506, 68.506, 120.334 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.210 - 1.950 |
R-factor | 0.1809 |
Rwork | 0.178 |
R-free | 0.23200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kcg |
RMSD bond length | 0.011 |
RMSD bond angle | 1.648 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.210 | 45.210 | 2.050 |
High resolution limit [Å] | 1.930 | 5.760 | 1.930 |
Rmerge | 0.077 | 0.036 | 1.270 |
Rmeas | 0.082 | 0.038 | 1.350 |
Number of reflections | 22140 | 947 | 3493 |
<I/σ(I)> | 16.12 | 49.33 | 1.5 |
Completeness [%] | 99.8 | 98.6 | 99.7 |
Redundancy | 9.386 | 8.667 | 9.264 |
CC(1/2) | 0.999 | 0.999 | 0.565 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 285 | 1 M Sodium citrate, 67 mM HEPES |