7ZGF
Crystal Structure of Amycolatopsis jejuensis Multiple Inositol Polyphosphate Phosphatase, apo-protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-05 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91587 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.848, 87.137, 70.358 |
Unit cell angles | 90.00, 97.40, 90.00 |
Refinement procedure
Resolution | 69.770 - 2.050 |
R-factor | 0.2101 |
Rwork | 0.207 |
R-free | 0.26190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6rxd |
RMSD bond length | 0.007 |
RMSD bond angle | 0.858 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.771 | 5.560 | 2.090 |
High resolution limit [Å] | 2.050 | 4.420 | 2.050 |
Rmerge | 0.182 | 0.070 | 0.733 |
Rpim | 0.133 | 0.052 | 0.528 |
Number of reflections | 51333 | 2603 | 2541 |
<I/σ(I)> | 4.3 | 9.6 | 1.4 |
Completeness [%] | 99.1 | 99.54 | 98.45 |
Redundancy | 2.8 | 2.7 | 2.86 |
CC(1/2) | 0.986 | 0.586 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 289 | 0.1 M NaCitrate, 20% PEG 3000 |