7ZD7
Crystal structure of the R24E/E352T double mutant of S-adenosyl-L-homocysteine hydrolase from Synechocystis sp. PCC 6803 cocrystallized with adenosine in the presence of Rb+ cations
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.8146 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 120.897, 196.825, 81.920 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.510 - 1.900 |
R-factor | 0.1664 |
Rwork | 0.166 |
R-free | 0.20010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7o5l |
Data reduction software | XDS (1.19.2-4158) |
Data scaling software | XSCALE |
Phasing software | REFMAC |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 103.015 | 103.015 | 2.020 |
High resolution limit [Å] | 1.900 | 5.690 | 1.900 |
Rmerge | 0.116 | 0.036 | 1.621 |
Rmeas | 0.125 | 0.039 | 1.752 |
Total number of observations | 1026447 | ||
Number of reflections | 148451 | 5539 | 23733 |
<I/σ(I)> | 11.11 | 40.76 | 1.08 |
Completeness [%] | 99.8 | 99.9 | 98.6 |
Redundancy | 6.914 | 6.885 | 6.903 |
CC(1/2) | 0.998 | 0.999 | 0.474 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 291 | 0.2 M sodium fluoride, 0.1 M Bis Tris propane pH 6.5, 20 % w/v PEG 3350 |