7Z1C
Nanobody H11-B5 and H11-F2 bound to RBD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 |
Unit cell lengths | 56.900, 56.940, 115.890 |
Unit cell angles | 80.08, 87.52, 66.11 |
Refinement procedure
Resolution | 52.000 - 1.900 |
R-factor | 0.1761 |
Rwork | 0.175 |
R-free | 0.19940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6zbp |
RMSD bond length | 0.007 |
RMSD bond angle | 1.391 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.000 | 1.950 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.043 | |
Number of reflections | 99469 | 6919 |
<I/σ(I)> | 10 | |
Completeness [%] | 96.4 | |
Redundancy | 3.6 | |
CC(1/2) | 0.998 | 0.504 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 6% v/v Tacsimate pH 6.0, 0.1 M MES monohydrate pH 6.0, 25% w/v Polyethylene glycol 4,000 |