7YZX
ScpA from Streptococcus pyogenes, D783A mutant.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 110 |
Detector technology | PIXEL |
Collection date | 2020-02-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96864 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 169.417, 169.417, 141.830 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.000 - 1.900 |
R-factor | 0.1999 |
Rwork | 0.198 |
R-free | 0.22890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eif |
RMSD bond length | 0.003 |
RMSD bond angle | 0.621 |
Data reduction software | XDS (Jan 31, 2020) |
Data scaling software | XDS (Jan 31, 2020) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.230 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.145 | 4.470 |
Rmeas | 0.151 | 4.639 |
Rpim | 0.040 | 1.206 |
Number of reflections | 93718 | 9050 |
<I/σ(I)> | 12.34 | 0.55 |
Completeness [%] | 99.7 | 97.88 |
Redundancy | 14 | 13.3 |
CC(1/2) | 0.999 | 0.188 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 2.4 M ammonium sulfate and 0.2 M Tris/HCl pH 7.4-7.8 |