7YZN
Structure of C-terminally truncated aIF5B from Pyrococcus abyssi complexed with GTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-20 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 72.260, 72.260, 205.820 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.750 - 1.700 |
R-factor | 0.1702 |
Rwork | 0.169 |
R-free | 0.19640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Pa-aIF5B |
RMSD bond length | 0.010 |
RMSD bond angle | 1.046 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.800 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.112 | 1.885 |
Number of reflections | 61785 | 9577 |
<I/σ(I)> | 20.2 | 1.88 |
Completeness [%] | 99.5 | |
Redundancy | 26.3 | |
CC(1/2) | 0.999 | 0.712 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 277 | 8% Tacsimate; 20% PEG3350 |