7YY6
Crystal structure of Mycobacterium abscessus Phosphopantetheine adenylyltransferase in complex with Fragment 10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-04-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9173 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 76.095, 124.936, 118.366 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.989 - 1.506 |
R-factor | 0.1955 |
Rwork | 0.195 |
R-free | 0.21390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5o06 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.021 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.1) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.9) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 64.990 | 64.990 | 1.680 |
High resolution limit [Å] | 1.506 | 3.370 | 1.510 |
Rmerge | 0.053 | 0.037 | 0.508 |
Rmeas | 0.057 | 0.040 | 0.553 |
Rpim | 0.022 | 0.016 | 0.218 |
Total number of observations | 53951 | 158868 | |
Number of reflections | 89086 | 8288 | 25084 |
<I/σ(I)> | 18.2 | 48.6 | 3.2 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 6.6 | 6.5 | 6.3 |
CC(1/2) | 0.999 | 0.998 | 0.920 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.2 M Sodium bromide, 20-24 % PEG3350, 0.1 M Bis-Tris propane pH 6.5 |