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7YY3

Crystal structure of Mycobacterium abscessus Phosphopantetheine adenylyltransferase in complex with Fragment 7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2016-08-10
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameC 2 2 21
Unit cell lengths75.931, 125.405, 119.364
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.053 - 1.535
R-factor0.211
Rwork0.210
R-free0.23590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5o06
RMSD bond length0.007
RMSD bond angle0.881
Data reduction softwareXDS
Data scaling softwareAimless (0.5.26)
Phasing softwarePHASER (2.5.7)
Refinement softwarePHENIX (1.9)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]64.95064.9501.620
High resolution limit [Å]1.5354.8601.540
Rmerge0.0880.0720.903
Rmeas0.0940.0780.977
Rpim0.0330.0280.366
Total number of observations2040484611
Number of reflections85029288112290
<I/σ(I)>13262.5
Completeness [%]100.0100100
Redundancy7.67.16.9
CC(1/2)0.9970.9950.747
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2920.2 M Sodium bromide, 20-24 % PEG3350, 0.1 M Bis-Tris propane pH 6.5

219869

PDB entries from 2024-05-15

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