7YS8
Crystal Structure of UDP-glucose 4-epimerase (Rv3634c) from Mycobacterium tuberculosis
Replaces: 6LTTExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-11-28 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.866, 76.850, 80.124 |
Unit cell angles | 90.00, 91.44, 90.00 |
Refinement procedure
Resolution | 25.230 - 2.020 |
R-factor | 0.1588 |
Rwork | 0.156 |
R-free | 0.20320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zrm |
RMSD bond length | 0.003 |
RMSD bond angle | 0.937 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.050 |
High resolution limit [Å] | 2.020 | 2.020 |
Rmerge | 0.148 | 0.610 |
Rmeas | 0.164 | 0.699 |
Rpim | 0.070 | 0.333 |
Total number of observations | 215119 | |
Number of reflections | 40386 | 1843 |
<I/σ(I)> | 6.7 | |
Completeness [%] | 99.5 | 92.1 |
Redundancy | 5.3 | 3.9 |
CC(1/2) | 0.735 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.2M Sodium acetate trihydrate, 0.1M Tris pH 8.5 30% PEG 4000 |