7YQ7
Crystal structure of photosystem II expressing psbA3 gene only
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 122.804, 228.456, 286.852 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.990 - 1.900 |
R-factor | 0.1482 |
Rwork | 0.147 |
R-free | 0.17710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wu2 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.990 | 5.660 | 2.010 |
High resolution limit [Å] | 1.900 | 4.020 | 1.900 |
Rmerge | 0.079 | 0.032 | 1.212 |
Rmeas | 0.086 | 0.035 | 1.311 |
Total number of observations | 4275973 | ||
Number of reflections | 628112 | 43199 | 100740 |
<I/σ(I)> | 15.81 | 50.8 | 1.63 |
Completeness [%] | 99.6 | 99.5 | 99.4 |
Redundancy | 6.808 | 6.556 | 6.823 |
CC(1/2) | 0.999 | 0.999 | 0.735 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 285 | 5% PEG 1450, 20mM NaCl, 10mM CaCl2, 40mM MgSO4, 20mM MES BUFFER pH 6.0, MICRO-BATCH METHOD UNDER OIL, TMPERATURE 285K |