7YP4
Crystal structure of elaiophylin glycosyltransferase in apo-form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-08 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 2 2 |
Unit cell lengths | 66.370, 131.210, 225.290 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.690 - 3.100 |
R-factor | 0.2163 |
Rwork | 0.214 |
R-free | 0.26530 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 7yp3 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 85.470 | 85.470 | 3.240 |
High resolution limit [Å] | 3.100 | 10.740 | 3.100 |
Rmerge | 0.140 | 0.034 | 0.963 |
Rmeas | 0.161 | 0.040 | 1.102 |
Rpim | 0.078 | 0.019 | 0.529 |
Total number of observations | 152755 | 3874 | 18899 |
Number of reflections | 36576 | 1017 | 4387 |
<I/σ(I)> | 7.7 | 18.7 | 1.7 |
Completeness [%] | 99.8 | 99.8 | 100 |
Redundancy | 4.2 | 3.8 | 4.3 |
CC(1/2) | 0.992 | 0.997 | 0.534 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.2 | 293 | 19% polyethylene glycol 3350, 0.15 M DL-Malic pH 7.2, 18% propylene glycol |