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7YNU

Crystal structure of Hen Egg white LYSOZYME introduced with O-(2-nitrobenzyl)-L-tyrosine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL32XU
Synchrotron siteSPring-8
BeamlineBL32XU
Temperature [K]93
Detector technologyPIXEL
Collection date2020-12-11
DetectorDECTRIS EIGER X 9M
Wavelength(s)1
Spacegroup nameP 43 21 2
Unit cell lengths79.680, 79.680, 37.050
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.840 - 1.440
R-factor0.1934
Rwork0.191
R-free0.22260
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ym8
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.84039.8401.530
High resolution limit [Å]1.4404.3201.440
Rmerge0.2230.1420.872
Rmeas0.2320.1480.901
Total number of observations350557
Number of reflections221199453595
<I/σ(I)>5.6212.961.06
Completeness [%]99.699.499.9
Redundancy15.84915.40215.564
CC(1/2)0.9650.9800.741
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP3.629328% NaCl, 8% PEG6000, 100 mM Na-acetate (pH3.6)

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PDB entries from 2024-10-09

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