7YN3
Crystal structure of CcbD complex with CcbZ carrier protein domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-17 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.07 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 89.572, 90.104, 124.411 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.790 - 2.100 |
R-factor | 0.177 |
Rwork | 0.175 |
R-free | 0.22640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7yn1 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.855 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.790 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.098 | 0.677 |
Number of reflections | 59483 | 4565 |
<I/σ(I)> | 14.7 | 2.9 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.6 | 7.9 |
CC(1/2) | 0.998 | 0.848 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.1 M MES (pH 6.7), 0.16 M magnesium chloride, 0.2 M sodium thiocyanate, 8% w/v PEG 8000 |