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7YKN

Crystal structure of (6-4) photolyase from Vibrio cholerae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU PhotonJet-R
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-10
DetectorRIGAKU HyPix-3000
Wavelength(s)1.54
Spacegroup nameP 64 2 2
Unit cell lengths200.751, 200.751, 77.023
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution24.620 - 2.500
R-factor0.2274
Rwork0.225
R-free0.28320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4dja
Data reduction softwareCrysalisPro
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.6202.580
High resolution limit [Å]2.5002.500
Rmerge1.3823.765
Rmeas1.3943.796
Rpim0.1780.485
Number of reflections320433130
<I/σ(I)>5.611.7
Completeness [%]99.699.97
Redundancy60.4
CC(1/2)0.9550.546
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH2775%(v/v) PEG400, 2 M ammonium citrate/citric acid pH 7.5, 1 M sodium sulfate decahydrate

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