Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YKM

Structure of DciA DUF721 domain from Deinococcus radiodurans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]80
Detector technologyPIXEL
Collection date2021-11-20
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.9762
Spacegroup nameC 1 2 1
Unit cell lengths92.593, 37.438, 86.285
Unit cell angles90.00, 164.34, 90.00
Refinement procedure
Resolution24.767 - 1.500
R-factor0.193799119145
Rwork0.193
R-free0.21523
RMSD bond length0.007
RMSD bond angle1.001
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.3401.530
High resolution limit [Å]1.5001.500
Rmerge0.0870.441
Number of reflections12543541
<I/σ(I)>8.9
Completeness [%]96.7
Redundancy3.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP52892.0 M Ammonium nitrate, 0.1 M Sodium acetate trihydrate pH 5.0, 200 mM NaCl

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon