7YKM
Structure of DciA DUF721 domain from Deinococcus radiodurans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2021-11-20 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.9762 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.593, 37.438, 86.285 |
Unit cell angles | 90.00, 164.34, 90.00 |
Refinement procedure
Resolution | 24.767 - 1.500 |
R-factor | 0.193799119145 |
Rwork | 0.193 |
R-free | 0.21523 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.001 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.340 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.087 | 0.441 |
Number of reflections | 12543 | 541 |
<I/σ(I)> | 8.9 | |
Completeness [%] | 96.7 | |
Redundancy | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 289 | 2.0 M Ammonium nitrate, 0.1 M Sodium acetate trihydrate pH 5.0, 200 mM NaCl |