7YHB
Crystal structure of VIM-2 MBL in complex with (2-(4-phenyl-1H-1,2,3-triazol-1-yl)benzyl)phosphonic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 195 |
Detector technology | PIXEL |
Collection date | 2019-12-24 |
Detector | DECTRIS PILATUS3 X CdTe 1M |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 100.517, 79.293, 67.395 |
Unit cell angles | 90.00, 130.16, 90.00 |
Refinement procedure
Resolution | 19.093 - 1.430 |
R-factor | 0.264 |
Rwork | 0.263 |
R-free | 0.30840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jn6 |
RMSD bond length | 0.023 |
RMSD bond angle | 0.959 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX (1.10.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.450 | 1.540 |
High resolution limit [Å] | 1.430 | 1.430 |
Rmerge | 0.097 | 0.891 |
Number of reflections | 91708 | 14215 |
<I/σ(I)> | 8.1 | |
Completeness [%] | 96.6 | |
Redundancy | 6 | |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2M Magnesium Formate, 23-30% (v/v) Polyethylene glycol 3350 |