7YGK
Crystal structure of a secretory phospholipase A2 from Sciscionella marina
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 5C (4A) |
| Synchrotron site | PAL/PLS |
| Beamline | 5C (4A) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-07-15 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 47.380, 39.680, 54.300 |
| Unit cell angles | 90.00, 91.55, 90.00 |
Refinement procedure
| Resolution | 27.140 - 1.240 |
| R-factor | 0.17661699011 |
| Rwork | 0.175 |
| R-free | 0.19716 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1faz |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.302 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.290 |
| High resolution limit [Å] | 1.240 | 1.240 |
| Number of reflections | 28410 | 2762 |
| <I/σ(I)> | 15.7 | |
| Completeness [%] | 99.1 | |
| Redundancy | 6.4 | |
| CC(1/2) | 0.995 | 0.995 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 5.5 | 295.15 | 100 mM citrate pH 5.5, 40% (v/v) PEG 600 |






