7YGF
Crystal structure of YggS from Fusobacterium nucleatum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-07-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.929, 146.375, 74.128 |
Unit cell angles | 90.00, 93.36, 90.00 |
Refinement procedure
Resolution | 37.000 - 2.080 |
R-factor | 0.1792 |
Rwork | 0.177 |
R-free | 0.22680 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.000 | 2.154 |
High resolution limit [Å] | 2.080 | 2.080 |
Number of reflections | 47064 | 1175 |
<I/σ(I)> | 27.13 | 4.333 |
Completeness [%] | 97.6 | |
Redundancy | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 295 | 0.1M sodium acetate trihydrate pH4.8, 0.19M Ammonium Sulfate , 21% (w/v) PEG 4000 |