7YE0
DF-SFX MmCPDII-DNA complex: steady state oxidized complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | SACLA BEAMLINE BL2 |
Synchrotron site | SACLA |
Beamline | BL2 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2018-05-27 |
Detector | MPCCD |
Wavelength(s) | 1.0875 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.580, 115.870, 169.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.279 - 2.750 |
R-factor | 0.1964 |
Rwork | 0.194 |
R-free | 0.24490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5zcw |
RMSD bond length | 0.003 |
RMSD bond angle | 0.766 |
Data reduction software | CrystFEL |
Data scaling software | pointless |
Phasing software | REFMAC |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.285 | 2.740 |
High resolution limit [Å] | 2.690 | 2.690 |
Number of reflections | 74762 | 4381 |
<I/σ(I)> | 3.47 | 1.26 |
Completeness [%] | 100.0 | 100 |
Redundancy | 77.42 | 36 |
CC(1/2) | 0.990 | 0.537 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 4.6 | 296 | 100 mM Sodium Acetate pH 4.6 250 mM ammonium sulfate 4% PEG4000 (w/v) 50 mM DTT |