7YDB
Crystal structure of the P450 BM3 heme domain mutant F87V/T268I in complex with N-imidazolyl-pentanoyl-L-phenylalanine,ethylbenzene and hydroxylamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-28 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.053, 144.347, 62.741 |
Unit cell angles | 90.00, 100.06, 90.00 |
Refinement procedure
Resolution | 45.725 - 1.472 |
R-factor | 0.1656 |
Rwork | 0.165 |
R-free | 0.19200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fag |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.170 | 72.170 | 1.550 |
High resolution limit [Å] | 1.470 | 4.660 | 1.470 |
Rmerge | 0.045 | 0.038 | 0.321 |
Rmeas | 0.055 | 0.048 | 0.411 |
Rpim | 0.032 | 0.029 | 0.252 |
Total number of observations | 13242 | 54255 | |
Number of reflections | 290176 | 5110 | 23568 |
<I/σ(I)> | 8.9 | 16.3 | 2.5 |
Completeness [%] | 97.6 | 94.3 | 96.1 |
Redundancy | 2.7 | 2.6 | 2.3 |
CC(1/2) | 0.995 | 0.979 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Ammonium acetate, 0.2 M Magnesium chloride hexahydrate, 0.1 M HEPES pH7.5, 25% PEG3350 |