7YCV
The Dimeric Format of Truncated PrpA (2-54)and RHH Domain of PrpA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-17 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.979183 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 83.252, 83.252, 70.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.340 - 2.610 |
R-factor | 0.2297 |
Rwork | 0.228 |
R-free | 0.27140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7b22 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.444 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.340 | 2.706 |
High resolution limit [Å] | 2.610 | 2.612 |
Rmerge | 0.104 | 0.851 |
Rmeas | 0.108 | 0.884 |
Rpim | 0.029 | 0.231 |
Number of reflections | 3976 | 373 |
<I/σ(I)> | 16.46 | 2.99 |
Completeness [%] | 99.3 | 97.9 |
Redundancy | 13.7 | 13.3 |
CC(1/2) | 0.998 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | 0.2 M Magnesium chloride hexahydrate, 0.1 M HEPES sodium pH 7.5, 30 % v/v PEG 400 |