7YBA
Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-4-hydroxy-2-oxoglutarate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-01 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97622 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.700, 70.202, 172.449 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 86.220 - 1.860 |
R-factor | 0.1825 |
Rwork | 0.181 |
R-free | 0.20190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jza |
RMSD bond length | 0.017 |
RMSD bond angle | 1.382 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 86.225 | 2.142 |
High resolution limit [Å] | 1.860 | 1.862 |
Rmerge | 0.115 | 1.582 |
Rmeas | 0.119 | 1.650 |
Rpim | 0.033 | 0.460 |
Number of reflections | 30212 | 1512 |
<I/σ(I)> | 15.1 | 1.7 |
Completeness [%] | 88.9 | 51.8 |
Redundancy | 13 | 12.5 |
CC(1/2) | 0.999 | 0.609 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.1 | 277 | 0.2 M Ammonium acetate, 20% w/v Polyethylene glycol 3,350 |