7YA8
The crystal structure of IpaH2.5 LRR domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.785, 137.686, 163.563 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 3.400 |
R-factor | 0.20039 |
Rwork | 0.198 |
R-free | 0.24494 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ya7 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.677 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.419 |
High resolution limit [Å] | 3.300 | 3.301 |
Rmerge | 0.152 | 0.053 |
Number of reflections | 22003 | 1436 |
<I/σ(I)> | 22 | 4.9 |
Completeness [%] | 96.0 | 100 |
Redundancy | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M succinic acid pH 6.6, 18.8% (w/v) polyethylene glycol (PEG)3350 |