7Y7S
QDE-1 in complex with DNA template, RNA primer and AMPNPP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-01-03 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97928 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 101.954, 120.412, 114.993 |
Unit cell angles | 90.00, 109.71, 90.00 |
Refinement procedure
Resolution | 30.100 - 2.700 |
R-factor | 0.21 |
Rwork | 0.208 |
R-free | 0.24520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j7n |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.100 | 30.000 | 2.800 |
High resolution limit [Å] | 2.700 | 5.800 | 2.700 |
Rmerge | 0.084 | 0.046 | 0.449 |
Rmeas | 0.091 | 0.050 | 0.494 |
Rpim | 0.034 | 0.019 | 0.202 |
Number of reflections | 67239 | 7232 | 5026 |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 94.2 | 99.4 | 70.6 |
Redundancy | 6.5 | 6.8 | 5.1 |
CC(1/2) | 0.999 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 291 | PEG 4000, 200 mM KCl |