Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7Y56

Crystal structure of NS1 nuclease domain in P41212 space group

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyCCD
Collection date2020-10-27
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.9793
Spacegroup nameP 41 21 2
Unit cell lengths69.360, 69.360, 108.856
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.151 - 1.752
R-factor0.181
Rwork0.180
R-free0.20220
Structure solution methodSAD
RMSD bond length0.007
RMSD bond angle0.843
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAutoSol
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.780
High resolution limit [Å]1.7504.7501.750
Rmerge0.0950.0770.558
Rmeas0.0980.0800.582
Rpim0.0270.0210.164
Total number of observations694290
Number of reflections5095425612552
<I/σ(I)>4.1
Completeness [%]100.099.7100
Redundancy13.613.812.4
CC(1/2)0.9520.957
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.2290Ammonium phosphate (dibasic) and Sodium acetate/Acetic acid pH 4.2 buffer

251174

PDB entries from 2026-03-25

PDB statisticsPDBj update infoContact PDBjnumon