7Y40
Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-08 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 61 |
Unit cell lengths | 134.975, 134.975, 59.041 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.440 - 1.700 |
Rwork | 0.178 |
R-free | 0.20540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Af2 predicted |
RMSD bond length | 0.006 |
RMSD bond angle | 1.504 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.440 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.556 | |
Number of reflections | 67651 | 3597 |
<I/σ(I)> | 24.5 | |
Completeness [%] | 100.0 | |
Redundancy | 20.4 | |
CC(1/2) | 0.089 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.2 M Ammonium sulfate, 0.1 M BisTris pH5.5, 25% PEG 3350 |