7Y39
Ubiquitin-like domain of human ZFAND1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-05-22 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.158, 34.284, 64.522 |
Unit cell angles | 90.00, 91.97, 90.00 |
Refinement procedure
Resolution | 23.490 - 1.880 |
R-factor | 0.2073 |
Rwork | 0.205 |
R-free | 0.22900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AF-Q8TCF1-F1 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20-4444) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.950 |
High resolution limit [Å] | 1.880 | 4.050 | 1.880 |
Rmerge | 0.048 | 0.042 | 0.244 |
Rmeas | 0.059 | 0.052 | 0.290 |
Rpim | 0.033 | 0.030 | 0.155 |
Total number of observations | 55773 | ||
Number of reflections | 17016 | 1781 | 1665 |
<I/σ(I)> | 12.5 | ||
Completeness [%] | 96.0 | 96.1 | 96.3 |
Redundancy | 3.3 | 3.2 | 3.3 |
CC(1/2) | 0.996 | 0.976 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1M MES (pH6.5), 1.2M Sodium Citrate |