7Y0E
Crystal structure of TMPRSS2 in complex with Camostat
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-10 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.979183 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.157, 93.537, 92.350 |
Unit cell angles | 90.00, 100.08, 90.00 |
Refinement procedure
Resolution | 45.460 - 2.390 |
R-factor | 0.1979 |
Rwork | 0.195 |
R-free | 0.23940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Model predicted by Alphafold |
RMSD bond length | 0.002 |
RMSD bond angle | 0.527 |
Data reduction software | XDS (2020-12-02) |
Data scaling software | XDS (2020-12-02) |
Phasing software | PHENIX (1.18.2_3874) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.460 | 45.460 | 2.530 |
High resolution limit [Å] | 2.390 | 7.140 | 2.390 |
Rmerge | 0.103 | 0.039 | 0.735 |
Rmeas | 0.119 | 0.045 | 0.843 |
Number of reflections | 32630 | 1249 | 5220 |
<I/σ(I)> | 10.17 | ||
Completeness [%] | 99.5 | ||
Redundancy | 4.02 | ||
CC(1/2) | 0.996 | 0.997 | 0.806 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M acetic acid/sodium acetate, pH 5.0, 16% w/v PEG 8000 |