7Y0A
Crystal structure of human short-chain acyl-CoA dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17B1 |
Synchrotron site | SSRF |
Beamline | BL17B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.987 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.894, 138.485, 150.475 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.493 - 2.317 |
R-factor | 0.1958 |
Rwork | 0.195 |
R-free | 0.23920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vig |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.493 | 2.400 |
High resolution limit [Å] | 2.317 | 2.317 |
Number of reflections | 72068 | 6934 |
<I/σ(I)> | 7.55 | |
Completeness [%] | 99.6 | |
Redundancy | 12.8 | |
CC(1/2) | 0.989 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 291 | 4% Tacsimate, 12% PEG3350, pH 5.0 |