7XZ7
Mutant (D137A) of the N-terminal domain of fucoidan lyase FdlA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 193.15 |
Detector technology | PIXEL |
Collection date | 2021-11-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 54.551, 58.386, 88.287 |
Unit cell angles | 90.17, 101.92, 92.25 |
Refinement procedure
Resolution | 58.330 - 1.980 |
R-factor | 0.1582 |
Rwork | 0.156 |
R-free | 0.19750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7xzf |
RMSD bond length | 0.018 |
RMSD bond angle | 1.448 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.330 | 2.000 |
High resolution limit [Å] | 1.980 | 1.980 |
Rmerge | 0.069 | 0.889 |
Rmeas | 0.092 | |
Rpim | 0.047 | |
Number of reflections | 67747 | 2754 |
<I/σ(I)> | 6.7 | |
Completeness [%] | 90.9 | 92 |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291.15 | 0.1M Tris, pH8.5, 0.2M Li2SO4, 30% (w/v) polyethylene glycol (PEG) 4000 |