Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7XS0

Trimer structure of HtrA from Helicobacter pylori bound with a tripeptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-07-02
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97775
Spacegroup nameH 3 2
Unit cell lengths139.506, 139.506, 191.374
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.210 - 2.590
R-factor0.2322
Rwork0.231
R-free0.25820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7xs2
RMSD bond length0.005
RMSD bond angle0.884
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.1_4122)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.660
High resolution limit [Å]2.5906.4102.600
Rmerge0.0640.0401.634
Rmeas0.0660.0411.679
Rpim0.0160.0100.383
Number of reflections2254215871460
<I/σ(I)>9.9
Completeness [%]100.0100100
Redundancy17.716.818.4
CC(1/2)0.9970.848
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52930.1 M Bis-Tris, pH 6.5, 2.2 M sodium malonate

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon